Colinear Regions in the Maize Genome
Show maize genome colinear regions between one chromosome and the rest of the genome

Select maize genetic map dataset:

Select a maize chromosome to plot:

Only show regions significant at % level (100% includes all regions)

Minimum size of a run (in number of markers)


Plot colinear regions between a pair of chromosomes

Select maize genetic map dataset:

Select a maize chromosome to plot: against

Only show regions significant at % level (100% includes all regions)

Minimum size of a run (in number of markers)
Include subruns


Colour scheme: colour greyscale

Compare maize genome colinear regions from different genetic maps or methods
Compare results from: to
OR
Compare alldata

Compare maps

Compare methods



Select a maize chromosome:

Only show regions significant at % level (100% includes all regions)

Minimum size of a run (in number of markers)


Plot an individual run in detail

Plot run from : Run number: